Heat the oven: Preheat to 350°F (175°C). Lightly grease an 8x8-inch baking dish or similar.
Mix the berries: In a bowl, toss blueberries with sweetener, lemon juice, lemon zest, vanilla, chia seeds or xanthan gum, and a pinch of salt.
Stir well and set aside so it starts to thicken.
Combine dry crumble ingredients: In a separate bowl, whisk almond flour, protein powder, coconut flour, sweetener, baking powder, cinnamon, and salt.
Cut in the fat: Add cold butter cubes to the dry mixture. Use a pastry cutter or your fingers to work it in until it looks like coarse crumbs with pea-size bits.
Add wet ingredients: Whisk the egg and vanilla together. Pour over the crumb mixture and stir.
Add almond milk 1 tablespoon at a time until the crumbs hold together when pressed but still look craggy.
Assemble: Pour the blueberry mixture into the baking dish and spread evenly. Sprinkle the crumble over the top in an even layer, leaving a few gaps for steam.
Bake: Place on the center rack and bake 28–35 minutes, until the topping is golden and the berries are bubbling around the edges.
Rest: Let the cobbler sit 10–15 minutes to set the juices. This helps the filling thicken and the crumble firm up.
Serve: Enjoy warm as-is, or add a dollop of whipped cream, Greek yogurt, or a scoop of low-carb ice cream.